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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015838618.1_cds_XP_016507030.1_20196
CDS Infomation

[gene=LOC107824736] [db_xref=GeneID:107824736] [protein=probable 2-oxoglutarate-dependent dioxygenase AOP1] [protein_id=XP_016507030.1] [location=complement(join(30615..30863,31224..31545,32146..32516))] [gbkey=CDS]
Sequence

ATGGGTTCCGAAACTATCAAGCTTCCTAATATAGACTTCTCCAATGTAGACCTAAAGCCA
GGCACACTTGTATGGAACCAAGTGAAAAGCCAAGTCCACAAAGCTCTAGTAAACTATGGC
TGTTTTGAAGCATCATTTGATAAAATTCCTATACACCTTCGAAAATCCATTTTTGAATCC
TTAAAAGAGCTTTTCGATCTCCCTTTACAAACCAAAATAAGAAACATTTCAACCAAACCT
TTCCATGGCTACGTTGGACAGTATCCAGCAGTTCCACTCTATGAAAGTATGGGTATTGAT
GATGCGAATATCCCAGATAAAGCTGAAAGTTTCACTCGAATTCTCTGGCCCGAAGGAAAC
CCTACTTTTTGCAAAACTATTCAGTCATACTCAGAGCAACTATCAGAATTGGATCAGACA
GTAAGGAGGATGATTCTGGAGAGTTTAGGGGTAGAAAATTATATGGGTGAGCATATGAAT
TCAACCAACTACCTTCTTCGGGTGATGAAGTATAAAGGACCTCAAAGCAGTGAGACTAAA
GTAGGACTAAATGCTCACACGGACAAGAATATTGTTACCATACTTTACCAAAATCAGGTA
AATGGTCTTGAAGTTTTGACCGAAGATGGGCAGTGGATCAATGTTGAACCTACACCTAAC
GCTTTCATAGTCATGATTGGAGACTCTCTATATGCATGGGCAAATGGTCGAGTTCATTCG
CCATATCATAGGGTGATGATGAGAGGAAACGAAGCAAGGTACTCAGTTGGTTTGTTTTCA
ATACCTAAAGCAGGGTATAAGATAATGGCACCAGAAGAGCTGGTAGATGAAGAGCATCCA
TTACTCTTTAAGCCCTTTGATCACGTTGAATTTCTAGCTTTCTATTACACTGAAGAAGGC
CAAAGATGTGGATCTGCTCTAAAGACCTATTGCGGTGTCTGA

Peptide Sequence

PEP ID

XP_016507030.1
PEP Infomation

PREDICTED: probable 2-oxoglutarate-dependent dioxygenase AOP1 [Nicotiana tabacum]
Sequence

MGSETIKLPNIDFSNVDLKPGTLVWNQVKSQVHKALVNYGCFEASFDKIPIHLRKSIFES
LKELFDLPLQTKIRNISTKPFHGYVGQYPAVPLYESMGIDDANIPDKAESFTRILWPEGN
PTFCKTIQSYSEQLSELDQTVRRMILESLGVENYMGEHMNSTNYLLRVMKYKGPQSSETK
VGLNAHTDKNIVTILYQNQVNGLEVLTEDGQWINVEPTPNAFIVMIGDSLYAWANGRVHS
PYHRVMMRGNEARYSVGLFSIPKAGYKIMAPEELVDEEHPLLFKPFDHVEFLAFYYTEEG
QRCGSALKTYCGV

Transcript Sequence

Gene sequence data has not been registered.